Download e-book for iPad: Algorithms in Computational Molecular Biology: Techniques, by Mourad Elloumi, Albert Y. Zomaya

By Mourad Elloumi, Albert Y. Zomaya

ISBN-10: 0470505192

ISBN-13: 9780470505199

This booklet represents the main entire and up to date selection of details with regards to computational molecular biology. Bringing the newest study into the vanguard of debate, Algorithms in Computational Molecular Biology reviews an important and necessary algorithms presently getting used within the box, and gives similar difficulties. It additionally succeeds the place different titles have failed, in providing a variety of info from the introductory basics correct as much as the most recent, so much complex degrees of research.

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Extra info for Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications

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Leena Salmela, Department of Computer Science, University of Helsinki, Finland. Martin Schiller, School of Life Sciences, University of Nevada Las Vegas, USA. Marinella Sciortino, Department of Mathematics and Applications, University of Palermo, Italy. Eduardo Sontag, Department of Mathematics, Rutgers, The State University of New Jersey, Piscataway, NJ, USA. Jana Sperschneider, School of Computer Science and Software Engineering, The University of Western Australia, Perth, Australia. Alexandros Stamatakis, The Exelixis Lab, Department of Computer Science, Technische Universit¨at M¨unchen, Germany.

In the LCS problem, we search for the longest common substring of two strings T1 and T2 . Initially and in time O(|T1 | + |T2 |), we construct the generalized suffix tree gST ({T1 , T2 }) of the two sequences. In this generalized tree, some leaves will store suffixes of the one string, some of the other, and some will store suffixes of both strings. We traverse all nodes of the tree, and we compute for every node the number of the characters from the root to it; by a similar traversal, we mark the nodes in whose subtrees are stored leaves of both strings.

Jin-Kao Hao, LERIA, University of Angers, France. Masud Hasan, Department of Computer Science and Engineering, Bangladesh University of Engineering and Technology (BUET), Dhaka, Bangladesh. Peter A. J. Hilbers, Eindhoven University of Technology, The Netherlands. P1: OTA/XYZ P2: ABC fm JWBS046-Elloumi November 18, 2010 8:32 Printer Name: Sheridan CONTRIBUTORS xxxv Jan Holub, Department of Theoretical Computer Science, Faculty of Information Technology, Czech Technical University in Prague, Czech Republic.

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Algorithms in Computational Molecular Biology: Techniques, Approaches and Applications by Mourad Elloumi, Albert Y. Zomaya

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